Calculate the rhythmic properties of each feature

Source: R/zeitzeiger_cut.R

DEPRECATED: We recommend instead using limorhyde, which has support for cosinor and periodic splines, in combination with methods such as limma.

zeitzeigerProp(fitResult, dopar = TRUE)

Arguments

fitResult

Output of zeitzeigerFit().
dopar

Logical indicating whether to process features in parallel. Use doParallel::registerDoParallel() to register the parallel backend.

Value

data.frame with a row for each feature.

Details

Calculate the rhythmic properties of each feature's spline fit: location and value of peak, location and value of trough, amplitude measured peak to trough, and signal-to-noise ratio (amplitude divided by the square root of the mean of the squared residuals).

See also

zeitzeigerFit()